test_workflows/ingestion/cellranger_postprocessing_test
Description
This component test the output of the integration test of the cellranger postprocessing workflow.
Inputs
Name | Type & Properties | Description |
|---|---|---|
--input | file required | Path to h5mu output. |
--input_og | file required | Path to the original h5mu file. |
--is_corrected | boolean required | Whether the input file has been corrected. |
Run this component
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \
-revision v3.0.2 \
-main-script target/nextflow/test_workflows/ingestion/cellranger_postprocessing_test/main.nf \
-params-file params.yaml Relationships
Used by
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No components use this component.
Current component
test_workflows/ingestion/cellranger_postprocessing_testopenpipeline v3.0.2
Uses
0 relationships
No component dependencies found.