compression/compress_h5mu
Description
Compress a MuData file.
Arguments
Name | Type & Properties | Description |
|---|---|---|
--input -i | file required | Path to the input .h5mu. |
--output | file required output | location of output file. |
--output_compression | string | Compression format to use for the output AnnData and/or Mudata objects. By default no compression is applied. |
Run this component
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
output: "$id.$key.output"
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \
-revision v4.0.1 \
-main-script target/nextflow/compression/compress_h5mu/main.nf \
-params-file params.yaml Relationships
Used by
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Current component
compression/compress_h5muopenpipeline v4.0.1
Uses
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