Viash Hub

Description

This component tests the output of the annotation of the scanvi annotation workflow.

Inputs

Name	Type & Properties	Description
--input	file required	Path to h5mu output.

Name

Type & Properties

--input

file

required

Run this component

Run the following command to execute this component with Nextflow:

cat > params.yaml <<'EOM'  
id: "run"  
publish_dir: "output/"  
EOM

nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \  
  -revision v4.0.3 \  
  -main-script target/nextflow/test_workflows/annotation/scanvi_scarches_test/main.nf \  
  -params-file params.yaml

Relationships

Used by

0 relationships

No components use this component.

Current component

test_workflows/annotation/scanvi_scarches_testopenpipeline v4.0.3

Uses

0 relationships

No component dependencies found.