dataflow/move_layer_spatialdata
Description
No description provided.
Inputs
Name | Type & Properties | Description |
|---|---|---|
--input | file required | Path to the input SpatialData Zarr store |
--input_layer | string | Name of the layer to move. If not provided, X will be moved. |
Outputs
Name | Type & Properties | Description |
|---|---|---|
--output | file output | Path to the output SpatialData Zarr store |
--output_layer | string | Name of the new layer to create with the moved data. If not provided, input layer will be moved to X. |
Options
Name | Type & Properties | Description |
|---|---|---|
--delete_input_layer | boolean | Whether to delete the input layer after moving it to the new layer. If true (default), the input layer is moved to the new location, if false it is copied to the new location and the original layer is retained. |
Run this component
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
output: "$id.$key.output"
delete_input_layer: [ true ]
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline_spatial.git \
-revision v0.7.0 \
-main-script target/nextflow/dataflow/move_layer_spatialdata/main.nf \
-params-file params.yaml Relationships
Used by
0 relationships
No components use this component.
Current component
dataflow/move_layer_spatialdataopenpipeline_spatial v0.7.0
Uses
0 relationships
No component dependencies found.