sync_resources

Description

Sync a Viash package's test resources to the local filesystem based on the
the .info.test_resources field in the _viash.yaml file. This is useful for
testing and debugging purposes.

Type

bash_script

License

MIT

Links

Repository

Contributors

Launch

Run this component

Run the following command to execute this component with Nextflow:

cat > params.yaml <<'EOM'  
input: [ "_viash.yaml" ]  
output: "$id.$key.output"  
id: "run"  
publish_dir: "output/"  
EOM

nextflow run https://packages.viash-hub.com/vsh/craftbox.git \  
  -revision v0.3.3 \  
  -main-script target/nextflow/sync_resources/main.nf \  
  -params-file params.yaml

Inputs

Name	Type & Properties	Description
--input -i	file	Path to the _viash.yaml project configuration file.

Name

Type & Properties

--input

-i

file

Outputs

Name	Type & Properties	Description
--output -o	file output	Path to the directory where the resources will be synced to.

Name

Type & Properties

--output

-o

file

output

Arguments

Name	Type & Properties	Description
--dryrun	boolean_true	Does not display the operations performed from the specified command.
--exclude	string multiple	Exclude all files or objects from the command that matches the specified pattern.

Name

Type & Properties

--dryrun

boolean_true

--exclude

string

multiple