Description
This component test the cutadapt output from the well_demultiplex subworkflow.
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/htrnaseq.git \
-revision v0.15.0-rc.2 \
-main-script target/nextflow/integration_test_components/well_demultiplexing/check_cutadapt_output/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--fastq_r1 | file required multiple |
--fastq_r2 | file required multiple |
--ids | string required multiple |