Description
Create a basic QC report in HTML format based on a number of esets.
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
output_report: "$id.$key.output_report.html"
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/htrnaseq.git \
-revision v0.15.0-rc.2 \
-main-script target/nextflow/report/create_report/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--eset | file required multiple |
--preproc_params | file |
--output_report | file required output |