io/publish_results

Description

Publish the results

Type

bash_script

License

MIT

Run this component

Run the following command to execute this component with Nextflow:

cat > params.yaml <<'EOM'  
output: "$id.$key.output"  
id: "run"  
publish_dir: "output/"  
EOM

nextflow run https://packages.viash-hub.com/vsh/htrnaseq.git \  
  -revision v0.8.2 \  
  -main-script target/nextflow/io/publish_results/main.nf \  
  -params-file params.yaml  

Input arguments

Name
Type & Properties
--star_output
file
required
multiple
--nrReadsNrGenesPerChrom
file
required
multiple
--star_qc_metrics
file
required
multiple
--eset
file
required
multiple
--f_data
file
required
multiple
--p_data
file
required
multiple
--html_report
file
required
--run_params
file
required

Output arguments

Name
Type & Properties
--output
file
output

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Viash Hub is a platform developed by Data Intuitive, a Belgian-based bioinformatics company specializing in data workflow development and deployment.