Description
A pipeline to split a multimodal mudata files into several unimodal mudata files.
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
id: "run"
output: "$id.$key.output./path/to/output"
output_types: "$id.$key.output_types.csv"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \
-revision 1.0.1 \
-main-script target/nextflow/workflows/multiomics/split_modalities/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--id | string required |
--input -i | file required |
Name | Type & Properties |
|---|---|
--output -o | file required output |
--output_types | file required output |