Description
Make a GTF file - filter by a specific attribute.
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
output_gtf: "$id.$key.output_gtf.gz"
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \
-revision v4.0.1 \
-main-script target/nextflow/reference/cellranger_mkgtf/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--input_gtf | file required |
--output_gtf | file required output |
--attribute | string required multiple |