Description
Generate an HTML report from the QC metrics
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
output_qc_report: "$id.$key.output_qc_report.html"
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline_qc.git \
-revision v0.1.0 \
-main-script target/nextflow/ingestion_qc/generate_html/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--input_data | file required |
--input_structure | file required |
Name | Type & Properties |
|---|---|
--output_qc_report | file required output |