Description
Combine fastq files from across samples into one event with a list of fastq files per orientation.
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
id: "run"
output_forward: "$id.$key.output_forward._*"
output_reverse: "$id.$key.output_reverse._*"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/demultiplex.git \
-revision v0.1.1 \
-main-script target/nextflow/dataflow/combine_samples/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--id | string required |
--forward_input | file required |
--reverse_input | file |
Name | Type & Properties |
|---|---|
--output_forward | file required multiple output |
--output_reverse | file multiple output |