Combine fastq files from across samples into one event with a list of fastq files per orientation.

Nextflow

MIT

gather_fastqs_and_validate

From a directory containing fastq files, gather the files per sample
and validate according to the contents of the sample sheet.

Nextflow

MIT

Demultiplexing of raw sequencing data

Nextflow

MIT

demultiplex v0.6.1

detect_demultiplexer

Detects the demultiplexer and accompanying sample information file which can be
used to generate the fastq files.

Nextflow

MIT

interop_summary_to_csv

Bash

MIT

Publish the processed results of the run

Bash

MIT

Unpack a .tar file.

Bash

MIT

Runner for demultiplexing of raw sequencing data

Nextflow

MIT

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Viash Hub is a platform developed by Data Intuitive, a Belgian-based bioinformatics company specializing in data workflow development and deployment.