Automated cell type annotation tool for scRNA-seq datasets on the basis of logistic regression classifiers optimised by the stochastic gradient descent algorithm.

OnClass is a python package for single-cell cell type annotation.

Performs popular major vote cell typing on single cell sequence data using multiple algorithms.

Automated cell type annotation tool for scRNA-seq datasets on the basis of random forest.

Semi-supervised model for single-cell transcriptomics data.

Automated cell type annotation tool for scRNA-seq datasets on the basis of SVMs.

Cluster cells using the [Leiden algorithm] [Traag18] implemented in the [Scanpy framework] [Wolf18].

Compress a MuData file.

Extract files from a tar archive

Converts a 10x h5 into an h5mu file.