Description
Join a data frame of length 1 (1 row index value) in .uns containing metadata to the .obs of a mudata file.
Run the following command to execute this component with Nextflow:
cat > params.yaml <<'EOM'
modality: [ "rna" ]
output: "$id.$key.output.h5mu"
id: "run"
publish_dir: "output/"
EOM
nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \
-revision 2.1.2 \
-main-script target/nextflow/metadata/join_uns_to_obs/main.nf \
-params-file params.yaml Name | Type & Properties |
|---|---|
--input -i | file required |
--modality | string |
--uns_key | string required |
--output -o | file required output |
--output_compression | string |