filter/intersect_obs

Description

Create an intersection between two or more modalities.

This component removes any observations which are not present in all modalities.

Type

python_script

License

MIT

Contributors

Run this component

Run the following command to execute this component with Nextflow:

cat > params.yaml <<'EOM'  
output: "$id.$key.output.h5mu"  
id: "run"  
publish_dir: "output/"  
EOM

nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \  
  -revision v4.0.2 \  
  -main-script target/nextflow/filter/intersect_obs/main.nf \  
  -params-file params.yaml  

Arguments

Name
Type & Properties
--input
file
required
--modalities
string
required
multiple
--output
file
output
--output_compression
string

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