query/tiledb_healthcheck

Description

Checks if a provided location can be queried as a TileDB-SOMA database.

Type

python_script

License

MIT

Links

Repository

Contributors

Launch

Run this component

Run the following command to execute this component with Nextflow:

cat > params.yaml <<'EOM'  
id: "run"  
publish_dir: "output/"  
EOM

nextflow run https://packages.viash-hub.com/vsh/openpipeline.git \  
  -revision v4.0.2 \  
  -main-script target/nextflow/query/tiledb_healthcheck/main.nf \  
  -params-file params.yaml

Input database

Name	Type & Properties	Description
--input_uri	string required	If specified, a URI containing the TileDB-SOMA objects.
--s3_region	string required	Region where the TileDB-SOMA database is hosted.

Name

Type & Properties

--input_uri

string

required

--s3_region

string

required